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A heap-based buffer overflow in H5VM_array_fill() in src/H5VM.c in HDF5 before 2.2.0 lets a remote attacker cause an application crash and possibly… (CVE-2026-106547)

0
Medium
Published: 10/06/2026 (10/06/2026, 21:17:00 UTC)
Source: GCVE Database
Product: hdf5

Description

A heap-based buffer overflow vulnerability exists in the H5VM_array_fill() function in src/H5VM.c in HDF5 versions before 2.2.0. This flaw allows a remote attacker to cause an application crash and potentially execute arbitrary code by using a specially crafted HDF5 file. The vulnerability arises when reading a dataset's unallocated chunks, where inconsistent metadata causes writes beyond the allocated buffer size. The attacker can control the content written via the fill value stored in the file.

CVSS v4.0

Attack Vector
Local
Attack Complexity
Low
Attack Requirements
None
Privileges Required
None
User Interaction
Passive
Vuln. Confidentiality
High
Vuln. Integrity
High
Vuln. Availability
High
Subsq. Confidentiality
None
Subsq. Integrity
None
Subsq. Availability
None
CVSS:4.0/AV:L/AC:L/AT:N/PR:N/UI:P/VC:H/VI:H/VA:H/SC:N/SI:N/SA:N

Affected software

Ubuntu:Pro:14.04:LTSmore threats →ghsa
hdf5
pkg:deb/ubuntu/hdf5?arch=source&distro=esm-infra-legacy/trusty
Affected versions
=1.8.11-3ubuntu1=1.8.11-5ubuntu1=1.8.11-5ubuntu2=1.8.11-5ubuntu6=1.8.11-5ubuntu7=1.8.11-5ubuntu7.1=1.8.11-5ubuntu7.1+esm1=1.8.11-5ubuntu7.1+esm2
Ubuntu:Pro:16.04:LTSmore threats →ghsa
hdf5
pkg:deb/ubuntu/hdf5?arch=source&distro=esm-apps/xenial
Affected versions
=1.8.15-patch1+docs-4=1.8.15-patch1+docs-5=1.8.16+docs-1=1.8.16+docs-2=1.8.16+docs-3=1.8.16+docs-3ubuntu1=1.8.16+docs-4=1.8.16+docs-4ubuntu1=1.8.16+docs-4ubuntu1.1=1.8.16+docs-4ubuntu1.1+esm1=1.8.16+docs-4ubuntu1.1+esm2
Ubuntu:Pro:18.04:LTSmore threats →ghsa
hdf5
pkg:deb/ubuntu/hdf5?arch=source&distro=esm-apps/bionic
Affected versions
=1.10.0-patch1+docs-4=1.10.0-patch1+docs-4ubuntu0.1~esm1=1.10.0-patch1+docs-4ubuntu0.1~esm2
Ubuntu:Pro:20.04:LTSmore threats →ghsa
hdf5
pkg:deb/ubuntu/hdf5?arch=source&distro=esm-apps/focal
Affected versions
=1.10.4+repack-10=1.10.4+repack-11=1.10.4+repack-11ubuntu1=1.10.4+repack-11ubuntu1+esm1
Ubuntu:20.04:LTSmore threats →ghsa
r-bioc-rhdf5lib
pkg:deb/ubuntu/r-bioc-rhdf5lib?arch=source&distro=focal
Affected versions
=1.6.0+dfsg-1=1.6.3+dfsg-1=1.8.0+dfsg-1
Ubuntu:22.04:LTSmore threats →ghsa
hdf5
pkg:deb/ubuntu/hdf5?arch=source&distro=jammy
Affected versions
=1.10.6+repack-5=1.10.7+repack-4ubuntu1=1.10.7+repack-4ubuntu2
Ubuntu:22.04:LTSmore threats →ghsa
r-bioc-rhdf5lib
pkg:deb/ubuntu/r-bioc-rhdf5lib?arch=source&distro=jammy
Affected versions
=1.12.1+dfsg-3=1.14.2+dfsg-2=1.16.0+dfsg-1
Ubuntu:24.04:LTSmore threats →ghsa
hdf5
pkg:deb/ubuntu/hdf5?arch=source&distro=noble
Affected versions
=1.10.8+repack1-1ubuntu1=1.10.10+repack-3ubuntu1=1.10.10+repack-3.1ubuntu3=1.10.10+repack-3.1ubuntu4
Ubuntu:24.04:LTSmore threats →ghsa
r-bioc-rhdf5lib
pkg:deb/ubuntu/r-bioc-rhdf5lib?arch=source&distro=noble
Affected versions
=1.22.0+dfsg-1=1.22.1+dfsg-1=1.24.0+dfsg-1=1.24.1+dfsg-1=1.24.2+dfsg-1=1.24.2+dfsg-1build1=1.24.2+dfsg-1build2
Ubuntu:26.10more threats →ghsa
hdf5
pkg:deb/ubuntu/hdf5?arch=source&distro=stonking
Affected versions
=1.14.6+repack-2=2.2.0+repack-4=2.2.0+repack-5
Ubuntu:26.10more threats →ghsa
r-bioc-rhdf5lib
pkg:deb/ubuntu/r-bioc-rhdf5lib?arch=source&distro=stonking
Affected versions
=1.28.0+dfsg-3=1.28.0+dfsg-4=2.0.0+dfsg-1=2.0.0+dfsg2-1
Ubuntu:26.04:LTSmore threats →ghsa
hdf5
pkg:deb/ubuntu/hdf5?arch=source&distro=resolute
Affected versions
=1.14.5+repack-3build1=1.14.5+repack-4=1.14.6+repack-2
Ubuntu:26.04:LTSmore threats →ghsa
r-bioc-rhdf5lib
pkg:deb/ubuntu/r-bioc-rhdf5lib?arch=source&distro=resolute
Affected versions
=1.28.0+dfsg-2build1=1.28.0+dfsg-3

Run on your own infrastructure? Check whether these packages are installed with threat-finder — our free open-source scanner.

AI-Powered Analysis

Machine-generated threat intelligence

AILast updated: 10/17/2026, 22:37:29 UTC

Technical Analysis

The vulnerability is a heap-based buffer overflow in the H5VM_array_fill() function of HDF5 prior to version 2.2.0. Specifically, when unallocated chunks of a dataset are read, the function H5D__fill_init() fills the fill-value buffer using datatype and dataspace metadata from the file. If this metadata is inconsistent with the buffer's allocated size, the function writes past the end of the buffer, leading to a heap overflow. Since the attacker controls the fill value stored in the file, they can influence the data written, potentially causing an application crash or arbitrary code execution.

Potential Impact

Exploitation of this vulnerability can lead to application crashes and possibly arbitrary code execution. The attacker can craft malicious HDF5 files that trigger the heap overflow when processed by vulnerable versions of the software. This can compromise the stability and security of applications using the affected HDF5 library versions.

Mitigation Recommendations

No explicit patch or remediation details are provided in the input data. Patch status is not yet confirmed — check the vendor advisory for current remediation guidance. Until a fix is applied, avoid processing untrusted or unverified HDF5 files to mitigate risk.

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Technical Details

Gcve Source
db.gcve.eu
Osv Id
UBUNTU-CVE-2026-106547
Osv Schema Version
1.7.0
Ecosystems
["Ubuntu:Pro:14.04:LTS","Ubuntu:Pro:16.04:LTS","Ubuntu:Pro:18.04:LTS","Ubuntu:Pro:20.04:LTS","Ubuntu:20.04:LTS","Ubuntu:22.04:LTS","Ubuntu:24.04:LTS","Ubuntu:26.10","Ubuntu:26.04:LTS"]
Cvss Version
4.0
State
PUBLISHED

Threat ID: 6ad3f4e82cdf04f656656dea

Added to database: 10/17/2026, 22:21:28 UTC

Last enriched: 10/17/2026, 22:37:29 UTC

Last updated: 10/17/2026, 22:37:29 UTC

Views: 2

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